Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939682.1_cds_XP_016484176.1_75215
CDS Infomation

[gene=LOC107804762] [db_xref=GeneID:107804762] [protein=pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like] [protein_id=XP_016484176.1] [location=complement(27852..29444)] [gbkey=CDS]
Sequence

ATGCTTGTCCGATTGGGTTCCCGTTGTCTCTTCTTCCCCAAAACCAAAACCCTCTTCACT
TCTCTCCATTTCCTCCGCTTCTTGTGTTCTTCAGAACTCCAGCACCTCGAGCCAGTCGAT
CCAAGGCCCTCACTGCCGCAACTGGAACCCTCAAACGACGCCGACTTGATTTCCCAAGTG
CTCCTCCAACACCACAACCCATTTCACGCCATGGAATCCTCTATTCAGCTCCACGGCATT
TCTCTCACCCCTTTCCTTGTCCATCAAACCCTCCTCCGCCTAAAACACTCTTCCAAAATT
GCCCTCTCCTTCTTCCAGTATTCCCAGTCCCATCCCAGTTGCTCCCTCGACTCCACCACT
TTTAATCTCCTCATCGACATTCTATGCAAAGTCCACCAGTTCGATGTTGCGTGGCAGCTT
ATTTTCCAAATGGACCAGAAGTGCATTAAACCCAACTTCACTACTTTCTATTTGTTGATC
CGTAGGCTTGTTTCTGCTGGTTTGACCCGTCAAGCCATTCGGGCATTCAGTGAAATGCAT
ATATTTATGGATGAAGAAAGTGAAGAGCAAGTGTGGAAGTCGTATTTTTGTTATCTTCTT
GATACCCTTTGTAAATATGGATATGTTAAAGTGGCTACTGAAGTGTTCAATAAGGAGAAG
TGGAGATTGGAGCTCAATCGTAAGATTTATACCATTCTAATATATGGTTGGTGTAAGGTG
AAGAATATAGACATGGCTAGGAGGTTTCTAGGGGAGATGTTGGAGAAGGGAATTGATCCG
AACGTGGTGAGTTACAATGTGTTGTTGAATGGGATTTGCAGGAGAGCGAGTTTGCATCCC
GAGGAAAGGTTTGAGAAGGTAATTAGGGAAGCAGAGAAGCTGTTTGATGAAATGACTGAA
CGAGGTGTGGAACCGGATGTGACCAGCTATTCTGTACTCCTTCATGTCTATAGCCGGGCT
CATAAGCCGGAGTTATTACTTGATAAATTAAGGATTATGAGGCGCAAAGGGATATGCCCG
AATATTGTGACATATAGCTCAGTCATCAAGTGCCTCTGCTCTTGTGGTAGGATTGAAGAC
GCTGAGCTTTTACTCGAGCTAATGGTTTCTAATGGGGTGACTCCCACATCCGCAACTTAC
AATTGCTTCTTTAAAGAGTACAAAGGGAGAAAGGATGTCAATGGTGCATTGAGGTTATAC
GAGAAGATGAGGCAGGGTTCCCTCTATCCACCTAACGTGAGTACGTATAATATATTGTTG
GGGATGTTATTGAAATTGGGTCGAATAGGGCTGGCCAGAGATATTTGGGAAGATATGAAG
GCTTCTGGAGCAGGGCCTGATTTGGACTCATATACATTGTTGGTTCATGGATTTTGCGAG
AAACAAAAATGGAAAACGGCCTGCGAATTCTTTATGGAAATGATAGAAAAAGGATATCTG
CCACATAAGGTAACCTTTGAGACACTTTATAGAGGCTTAATACAATCCAATATGTTGAGA
ACGTGGAGAAGGTTAAAGAAAAGGCTTGATGAGGAATCAATTACTTTTGGTTCAGAGTTT
GAAAATTATCACCTAAAGCCTTATAGAAGGTGA

Peptide Sequence

PEP ID

XP_016484176.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Nicotiana tabacum]
Sequence

MLVRLGSRCLFFPKTKTLFTSLHFLRFLCSSELQHLEPVDPRPSLPQLEPSNDADLISQV
LLQHHNPFHAMESSIQLHGISLTPFLVHQTLLRLKHSSKIALSFFQYSQSHPSCSLDSTT
FNLLIDILCKVHQFDVAWQLIFQMDQKCIKPNFTTFYLLIRRLVSAGLTRQAIRAFSEMH
IFMDEESEEQVWKSYFCYLLDTLCKYGYVKVATEVFNKEKWRLELNRKIYTILIYGWCKV
KNIDMARRFLGEMLEKGIDPNVVSYNVLLNGICRRASLHPEERFEKVIREAEKLFDEMTE
RGVEPDVTSYSVLLHVYSRAHKPELLLDKLRIMRRKGICPNIVTYSSVIKCLCSCGRIED
AELLLELMVSNGVTPTSATYNCFFKEYKGRKDVNGALRLYEKMRQGSLYPPNVSTYNILL
GMLLKLGRIGLARDIWEDMKASGAGPDLDSYTLLVHGFCEKQKWKTACEFFMEMIEKGYL
PHKVTFETLYRGLIQSNMLRTWRRLKKRLDEESITFGSEFENYHLKPYRR

Transcript Sequence

Gene sequence data has not been registered.